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Image of CLINICAL NAMED ENTITY RECOGNITION PADA DATA BIOMEDIS MENGGUNAKAN VARIAN MODEL BERT UNTUK KASUS BIOMEDIS

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CLINICAL NAMED ENTITY RECOGNITION PADA DATA BIOMEDIS MENGGUNAKAN VARIAN MODEL BERT UNTUK KASUS BIOMEDIS

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This study aims to develop a system capable of identifying and classifying medical entities from unstructured biomedical texts, thereby supporting Clinical analysis and health research. The author trained and evaluated three BERT-based models: BioBERT, Clinical BERT, and BlueBERT, for the task of Clinical Named Entity Recognition (CNER). Model performance was measured using precision, recall, and F1-Score metrics on three biomedical datasets: NCBI, BC2GM, and JNLPBA. The results consistently show that BioBERT delivers the best performance across most datasets. On NCBI, BioBERT achieved the highest F1-Score of 93%, outperforming Clinical BERT and BlueBERT (both 91%). In BC2GM, BioBERT also excelled with 91%, while other models reached 90%. The JNLPBA dataset proved more challenging, with BioBERT achieving the highest F1-Score of only 80%. A significant performance improvement, up to 10% in some cases, was observed in the final experiments due to the application of full fine-tuning. This research contributes to identifying the most optimal transformer model for automated information extraction applications in healthcare.


Availability
Inventory Code Barcode Call Number Location Status
2507004329T179473T1794732025Central Library (Reference)Available but not for loan - Not for Loan
Detail Information
Series Title
-
Call Number
T1794732025
Publisher
Indralaya : Prodi Sistem Komputer, Fakultas Ilmu Komputer Universitas Sriwijaya., 2025
Collation
xvii, 117 hlm.; ilus.; tab.; 29 cm.
Language
Indonesia
ISBN/ISSN
-
Classification
004.07
Content Type
Text
Media Type
-
Carrier Type
-
Edition
-
Subject(s)
Sistem komputer
Specific Detail Info
-
Statement of Responsibility
MI
Other version/related

No other version available

File Attachment
  • CLINICAL NAMED ENTITY RECOGNITION PADA DATA BIOMEDIS MENGGUNAKAN VARIAN MODEL BERT UNTUK KASUS BIOMEDIS
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